Determination of Alzheimer's Disease Stages by Artificial Learning Algorithms
| dc.contributor.author | Bulut, Nurgül | |
| dc.contributor.author | Çakar, Tuna | |
| dc.contributor.author | Arslan, İlker | |
| dc.contributor.author | Akıncı, Zeynep Karaoğlu | |
| dc.contributor.author | Oner, Kevser Setenay | |
| dc.date.accessioned | 2025-10-05T16:35:45Z | |
| dc.date.available | 2025-10-05T16:35:45Z | |
| dc.date.issued | 2025 | |
| dc.description.abstract | Introduction: This study aims to determine the stages of Alzheimer's disease (AD) using different machine learning algorithms, and compares the performance of these models. Methods: Demographic, genetic, and neurocognitive inventory data from the National Alzheimer's Coordinating Center (NACC) database as well as brain volume/thickness data from magnetic resonance imaging (MRI) scans were used. Deep Neural Networks, Ordinal Logistic Regression, Random Forest, Gaussian Naive Bayes, XGBoost, and LightGBM models were used to identify four different ordinal stages of AD. Results: Although the performance measures of the developed models were similar, the highest classification rate of AD stages was achieved by the Random Forest model (accuracy: 0.86; F1 score: 0.86; AUC: 0.95). The outputs of the model with the best performance were explained by the SHapley Addictive exPlanations (SHAP) method. Conclusions: This indicates that non-invasive markers and machine learning models can be used effectively in early diagnosis and decision support systems to predict stages of AD. © 2025 Elsevier B.V., All rights reserved. | |
| dc.description.sponsorship | The NACC database is funded by NIA/NIH Grant U24 AG072122. NACC data are contributed by the NIA-funded ADRCs: P30 AG062429 (PI James Brewer, MD, PhD), P30 AG066468 (PI Oscar Lopez, MD), P30 AG062421 (PI Bradley Hyman, MD, PhD), P30 AG066509 (PI Thomas Grabowski, MD), P30 AG066514 (PI Mary Sano, PhD), P30 AG066530 (PI Helena Chui, MD), P30 AG066507 (PI Marilyn Albert, PhD), P30 AG066444 (PI David Holtzman, MD), P30 AG066518 (PI Lisa Silbert, MD, MCR), P30 AG066512 (PI Thomas Wisniewski, MD), P30 AG066462 (PI Scott Small, MD), P30 AG072979 (PI David Wolk, MD), P30 AG072972 (PI Charles DeCarli, MD), P30 AG072976 (PI Andrew Saykin, PsyD), P30 AG072975 (PI Julie A. Schneider, MD, MS), P30 AG072978 (PI Ann McKee, MD), P30 AG072977 (PI Robert Vassar, PhD), P30 AG066519 (PI Frank LaFerla, PhD), P30 AG062677 (PI Ronald Petersen, MD, PhD), P30 AG079280 (PI Jessica Langbaum, PhD), P30 AG062422 (PI Gil Rabinovici, MD), P30 AG066511 (PI Allan Levey, MD, PhD), P30 AG072946 (PI Linda Van Eldik, PhD), P30 AG062715 (PI Sanjay Asthana, MD, FRCP), P30 AG072973 (PI Russell Swerdlow, MD), P30 AG066506 (PI Glenn Smith, PhD, ABPP), P30 AG066508 (PI Stephen Strittmatter, MD, PhD), P30 AG066515 (PI Victor Henderson, MD, MS), P30 AG072947 (PI Suzanne Craft, PhD), P30 AG072931 (PI Henry Paulson, MD, PhD), P30 AG066546 (PI Sudha Seshadri, MD), P30 AG086401 (PI Erik Roberson, MD, PhD), P30 AG086404 (PI Gary Rosenberg, MD), P20 AG068082 (PI Angela Jefferson, PhD), P30 AG072958 (PI Heather Whitson, MD), P30 AG072959 (PI James Leverenz, MD). | |
| dc.description.sponsorship | The NACC database is funded by NIA/NIH Grant U24 AG072122. NACC data are contributed by the NIA -fundedADRCs: P30AG062429 (PI James Brewer, MD, PhD), P30 AG066468 (PI Oscar Lopez, MD), P30 AG062421 (PI Bradle y Hyman, MD, PhD), P30 AG066509 (PI Thomas Grabowski, MD), P30 AG066514 (PI Mary Sano, PhD), P30 AG066530 (PI Helena Chui, MD), P30 AG066507 (PI Marilyn Albert, PhD), P30 AG066444 (PI David Holtzman, MD), P30 AG066518 (PI Lisa Silbert, MD, MCR), P30 AG0665 (PI Thomas Wisniewski, MD), P30AG066462 (PI Scott Small, MD), P30 AG072979 (PI David oW lk, MD), P30 AG072972 (PI Charles DeCarli, MD), P30 AG072976 (PI Andrew Saykin, PsyD), P30 AG072975 (PI Julie A. Schneider, MD, MS), P30 AG072978 (PI Ann McKee, MD), P30 AG072977 (PI Robert asV sar, PhD), P30 AG066519 (PI Frank LaFerla, PhD), P30 AG062677 (PI Ronald Petersen, MD, PhD), P30 AG079280 (PI Jessica Langbaum, PhD), P30 AG062422 (PI Gil Rabinovici, MD), P30 AG0665 1 (PI Allan ,Levey MD, PhD), P30AG072946 (PI AG062715 (PI Sanjay Asthana, MD, FRCP), P30 AG072973 (PI Russell Swerdlo,w MD), P30 AG066506 (PI Glenn Smith, PhD, ABPP), P30 AG066508 (PI Stephen Strittmatter, MD, PhD), P30AG066515 (PI Victor Henderson, MD, MS), P30AG072947 Suzanne Craft, PhD), P30 AG072931 (PI Henry Paulson, MD, PhD), P30 AG066546 (PI Sudha Seshadri, MD), P30 AG086401 (PI Erik Roberson, MD, PhD), P30 AG086404 (PI Gary Rosenberg, MD), P20 | |
| dc.description.sponsorship | National Institute on Aging, NIA; National Institutes of Health, USNIH, (P30 AG066530, P30 AG066546, P30 AG072978, P30 AG066444, P30 AG066514, P30 AG072973, P30 AG062422, P30 AG062421, P30 AG062429, P30 AG072946, P30 AG072975, P30 AG086404, P20 AG068082, P30 AG086401, P30 AG066509, P30 AG072979, P30 AG066512, P30 AG062677, P30 AG066507, P30 AG066462, P30 AG072977, P30 AG066468, P30 AG066511, P30 AG062715, P30 AG079280, P30 AG072958, P30 AG072972, P30 AG066518, P30 AG072959, P30 AG072931, P30 AG072947, P30 AG072976, P30 AG066515, P30 AG066508, P30 AG066519, P30 AG066506, U24 AG072122) | |
| dc.identifier.doi | 10.6000/1929-6029.2025.14.50 | |
| dc.identifier.issn | 1929-6029 | |
| dc.identifier.scopus | 2-s2.0-105016678414 | |
| dc.identifier.uri | https://doi.org/10.6000/1929-6029.2025.14.50 | |
| dc.identifier.uri | https://hdl.handle.net/20.500.11779/3094 | |
| dc.language.iso | en | |
| dc.publisher | Lifescience Global | |
| dc.relation.ispartof | International Journal of Statistics in Medical Research | |
| dc.rights | info:eu-repo/semantics/closedAccess | |
| dc.subject | Alzheimer's Disease | |
| dc.subject | Artificial Intelligence | |
| dc.subject | Artificial Learning Algorithm | |
| dc.subject | Explainable Artificial Intelligence | |
| dc.subject | Machine Learning | |
| dc.subject | National Alzheimer's Coordinating Center | |
| dc.subject | Shapley Addictive Explanations | |
| dc.subject | Matplotlib 3.6.0 | |
| dc.subject | Pandas 1.5.0 | |
| dc.subject | Python Libraries Numpy 1.23.0 | |
| dc.subject | Python Programming Language Version 3.10 | |
| dc.subject | Scikit-Learn 1.1.3 | |
| dc.subject | Statsmodel 0.13.5 | |
| dc.subject | Tensorflow 2.10 | |
| dc.subject | XGBoost | |
| dc.subject | Adult | |
| dc.subject | Aged | |
| dc.subject | Alzheimer Disease | |
| dc.subject | Article | |
| dc.subject | Bayesian Learning | |
| dc.subject | Cognitive Defect | |
| dc.subject | Controlled Study | |
| dc.subject | Decision Support System | |
| dc.subject | Deep Neural Network | |
| dc.subject | Depression | |
| dc.subject | Diagnostic Test Accuracy Study | |
| dc.subject | Geriatric Depression Scale | |
| dc.subject | Human | |
| dc.subject | Learning Algorithm | |
| dc.subject | Logistic Regression Analysis | |
| dc.subject | Machine Learning Algorithm | |
| dc.subject | Major Clinical Study | |
| dc.subject | Mini Mental State Examination | |
| dc.subject | Montreal Cognitive Assessment | |
| dc.subject | Neuropathology | |
| dc.subject | Neuropsychiatric Inventory | |
| dc.subject | Nuclear Magnetic Resonance Imaging | |
| dc.subject | Physician | |
| dc.subject | Principal Component Analysis | |
| dc.subject | Random Forest | |
| dc.subject | Receiver Operating Characteristic | |
| dc.subject | Sensitivity and Specificity | |
| dc.title | Determination of Alzheimer's Disease Stages by Artificial Learning Algorithms | |
| dc.type | Article | |
| dspace.entity.type | Publication | |
| gdc.author.institutional | Çakar, Tuna | |
| gdc.author.scopusid | 56806587300 | |
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| gdc.coar.access | metadata only access | |
| gdc.coar.type | text::journal::journal article | |
| gdc.collaboration.industrial | false | |
| gdc.description.department | Mühendislik Fakültesi, Bilgisayar Mühendisliği Bölümü | |
| gdc.description.departmenttemp | [Bulut N.] Department of Biostatistics and Medical Informatics, Faculty of Medicine, Istanbul Medeniyet University, Istanbul, 34000, Turkey; [Cakar T.] Department of Computer Engineering, Faculty of Engineering, MEF University, Istanbul, 34396, Turkey; [Arslan I.] Department of Mechanical Engineering, Faculty of Engineering, MEF University, Istanbul, 34396, Turkey; [Akinci Z.K.] Department of Neurology, Sultan Abdulhamid Han Research and Training Hospital, Saglik Bilimleri University, Istanbul, 34668, Turkey; [Oner K.S.] Department of Biostatistics, Faculty of Medicine, Eskisehir Osmangazi University, Eskisehir, 26040, Turkey | |
| gdc.description.endpage | 542 | |
| gdc.description.publicationcategory | Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı | |
| gdc.description.scopusquality | Q4 | |
| gdc.description.startpage | 532 | |
| gdc.description.volume | 14 | |
| gdc.description.wosquality | N/A | |
| gdc.identifier.openalex | W4413876639 | |
| gdc.index.type | Scopus | |
| gdc.openalex.collaboration | National | |
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| gdc.publishedmonth | Eylül | |
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| gdc.virtual.author | Çakar, Tuna | |
| gdc.virtual.author | Arslan, İlker | |
| gdc.yokperiod | YÖK - 2025-26 | |
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